Is Polymerase Chain Reaction a diagnostics instrument? | |
We Are Slaves (OP) User ID: 72946045 ![]() 03/18/2022 12:50 AM ![]() Report Abusive Post Report Copyright Violation | ![]() Warning : The post above may be pure speculation. Thread: World War M3me Thread: Is Polymerase Chain Reaction a diagnostics instrument? (Ignore the UK flag, i'm Canadian) |
Anonymous Coward User ID: 82052371 ![]() 03/18/2022 12:54 AM Report Abusive Post Report Copyright Violation | |
Anonymous Coward User ID: 82511086 ![]() 03/18/2022 12:58 AM Report Abusive Post Report Copyright Violation | |
Anonymous Coward User ID: 76713546 ![]() 03/18/2022 05:16 PM Report Abusive Post Report Copyright Violation | |
We Are Slaves (OP) User ID: 78097503 ![]() 03/18/2022 05:19 PM ![]() Report Abusive Post Report Copyright Violation | It's used frequently in cancer diagnostics, so yes. To be used for covid...NO Quoting: Anonymous Coward 76713546 Could you expand on that? Warning : The post above may be pure speculation. Thread: World War M3me Thread: Is Polymerase Chain Reaction a diagnostics instrument? (Ignore the UK flag, i'm Canadian) |
Anonymous Coward User ID: 79644573 ![]() 03/18/2022 05:22 PM Report Abusive Post Report Copyright Violation | I could ask this question all day long on fakebook and not get an answer, lets see what GLP has to say Quoting: We Are Slaves GLP SAY: hello google, what is PCR? Polymerase chain reaction is a method widely used to rapidly make millions to billions of copies of a specific DNA sample, allowing scientists to take a very small sample of DNA and amplify it to a large enough amount to study in detail. PCR was invented in 1983 by the American biochemist Kary Mullis at Cetus Corporation; Mullis and biochemist Michael Smith, who had developed other essential ways of manipulating DNA, were jointly awarded the Nobel Prize in Chemistry in 1993. PCR is fundamental to many of the procedures used in genetic testing and research, including analysis of ancient samples of DNA and identification of infectious agents. Using PCR, copies of very small amounts of DNA sequences are exponentially amplified in a series of cycles of temperature changes. PCR is now a common and often indispensable technique used in medical laboratory research for a broad variety of applications including biomedical research and criminal forensics You're a nob... |
FirstCut User ID: 82254608 ![]() 03/18/2022 05:22 PM Report Abusive Post Report Copyright Violation | |
We Are Slaves (OP) User ID: 78097503 ![]() 03/18/2022 05:25 PM ![]() Report Abusive Post Report Copyright Violation | I could ask this question all day long on fakebook and not get an answer, lets see what GLP has to say Quoting: We Are Slaves GLP SAY: hello google, what is PCR? Polymerase chain reaction is a method widely used to rapidly make millions to billions of copies of a specific DNA sample, allowing scientists to take a very small sample of DNA and amplify it to a large enough amount to study in detail. PCR was invented in 1983 by the American biochemist Kary Mullis at Cetus Corporation; Mullis and biochemist Michael Smith, who had developed other essential ways of manipulating DNA, were jointly awarded the Nobel Prize in Chemistry in 1993. PCR is fundamental to many of the procedures used in genetic testing and research, including analysis of ancient samples of DNA and identification of infectious agents. Using PCR, copies of very small amounts of DNA sequences are exponentially amplified in a series of cycles of temperature changes. PCR is now a common and often indispensable technique used in medical laboratory research for a broad variety of applications including biomedical research and criminal forensics You're a nob... Congrats, you know how to copy/paste...but that quote doesn't really answer the question. Warning : The post above may be pure speculation. Thread: World War M3me Thread: Is Polymerase Chain Reaction a diagnostics instrument? (Ignore the UK flag, i'm Canadian) |
Anonymous Coward User ID: 76713546 ![]() 03/18/2022 05:29 PM Report Abusive Post Report Copyright Violation | It's used frequently in cancer diagnostics, so yes. To be used for covid...NO Quoting: Anonymous Coward 76713546 Could you expand on that? Yes, when you do a biopsy on a "mass" its typically sent to a pathologist for identification. Sometimes the pathologist can't figure out what type of cancer it is or the site of origin (what organ did the cancer originate from). The site of origin is important for the course of treatment. The sample is then sent to a specialty lab for genotyping where they use PCR to amplify the specific parts of the genome in order to sequence it. From this they can tell the site of origin. They use PCR and other tools for this. Something else they can do is take, let's say lung tissue that is identified as cancer, but they then have to sequence it to figure out the subtype of lung cancer so they can select the appropriate therapy. They amplify specific genes in that cancerous tissue to isolate the genes of interest. They them sequence those genes to see where the mutation occurs and what the specific mutation is. By doing this they can select the appropriate therapy for that specific subtype of lung cancer. |
Anonymous Coward User ID: 76713546 ![]() 03/18/2022 05:31 PM Report Abusive Post Report Copyright Violation | There are literally hundreds of molecular diagnostic commercial labs in the US alone. They provide Dr's with the information that leads to an official diagnosis but the molecular diagnostic test provides the diagnosis by way of pathologists and molecular scientists that work for that lab. |
Anonymous Coward User ID: 70973481 ![]() 03/18/2022 05:34 PM Report Abusive Post Report Copyright Violation | |
Anonymous Coward User ID: 70973481 ![]() 03/18/2022 05:35 PM Report Abusive Post Report Copyright Violation | |
We Are Slaves (OP) User ID: 78097503 ![]() 03/18/2022 05:35 PM ![]() Report Abusive Post Report Copyright Violation | It's used frequently in cancer diagnostics, so yes. To be used for covid...NO Quoting: Anonymous Coward 76713546 Could you expand on that? Yes, when you do a biopsy on a "mass" its typically sent to a pathologist for identification. Sometimes the pathologist can't figure out what type of cancer it is or the site of origin (what organ did the cancer originate from). The site of origin is important for the course of treatment. The sample is then sent to a specialty lab for genotyping where they use PCR to amplify the specific parts of the genome in order to sequence it. From this they can tell the site of origin. They use PCR and other tools for this. Something else they can do is take, let's say lung tissue that is identified as cancer, but they then have to sequence it to figure out the subtype of lung cancer so they can select the appropriate therapy. They amplify specific genes in that cancerous tissue to isolate the genes of interest. They them sequence those genes to see where the mutation occurs and what the specific mutation is. By doing this they can select the appropriate therapy for that specific subtype of lung cancer. Interesting, thank you. Warning : The post above may be pure speculation. Thread: World War M3me Thread: Is Polymerase Chain Reaction a diagnostics instrument? (Ignore the UK flag, i'm Canadian) |
Anonymous Coward User ID: 70973481 ![]() 03/18/2022 05:37 PM Report Abusive Post Report Copyright Violation | |
Anonymous Coward User ID: 76713546 ![]() 03/18/2022 05:39 PM Report Abusive Post Report Copyright Violation | |
We Are Slaves (OP) User ID: 78097503 ![]() 03/18/2022 05:39 PM ![]() Report Abusive Post Report Copyright Violation | Anyone want to balance out that Juan Star or are we just into war these days... ;) Warning : The post above may be pure speculation. Thread: World War M3me Thread: Is Polymerase Chain Reaction a diagnostics instrument? (Ignore the UK flag, i'm Canadian) |
Anonymous Coward User ID: 78890038 ![]() 03/18/2022 05:41 PM Report Abusive Post Report Copyright Violation | |
Anonymous Coward User ID: 76713546 ![]() 03/18/2022 05:43 PM Report Abusive Post Report Copyright Violation | It's used frequently in cancer diagnostics, so yes. To be used for covid...NO Quoting: Anonymous Coward 76713546 Could you expand on that? Yes, when you do a biopsy on a "mass" its typically sent to a pathologist for identification. Sometimes the pathologist can't figure out what type of cancer it is or the site of origin (what organ did the cancer originate from). The site of origin is important for the course of treatment. The sample is then sent to a specialty lab for genotyping where they use PCR to amplify the specific parts of the genome in order to sequence it. From this they can tell the site of origin. They use PCR and other tools for this. Something else they can do is take, let's say lung tissue that is identified as cancer, but they then have to sequence it to figure out the subtype of lung cancer so they can select the appropriate therapy. They amplify specific genes in that cancerous tissue to isolate the genes of interest. They them sequence those genes to see where the mutation occurs and what the specific mutation is. By doing this they can select the appropriate therapy for that specific subtype of lung cancer. Interesting, thank you. You bet. This is what I do for a living. They also use similar procedures for subtyping all sorts of cancer like breast cancer. For each subtype of lung/breast/pancreatic/etc cancer there are different treatment protocols depending on the specific mutations the patient has in their cancer cells. If you treat lung cancer 1 with the protocol for lung cancer 2 it won't work and only causes harm to the patient. |
We Are Slaves (OP) User ID: 78097503 ![]() 03/18/2022 05:44 PM ![]() Report Abusive Post Report Copyright Violation | OP, the problem is when PCR is used incorrectly, such as in the case of covid where they amplified the sample to such an extent that they were detecting covid where none really existed in sufficient amounts to cause disease, or they were amplifying "dead" virus 40+ times and saying you have covid. PCR is an amazing technology if used appropriately. In the case of covid it was abused to show something that wasn't there. Quoting: Anonymous Coward 76713546 This is how i've understood it as well...So essentially the DNA result is so far away from the original that the margin of error is almost 100% right? Warning : The post above may be pure speculation. Thread: World War M3me Thread: Is Polymerase Chain Reaction a diagnostics instrument? (Ignore the UK flag, i'm Canadian) |
Anonymous Coward User ID: 80177027 03/18/2022 05:49 PM Report Abusive Post Report Copyright Violation | |
Anonymous Coward User ID: 70973481 ![]() 03/18/2022 05:52 PM Report Abusive Post Report Copyright Violation | |
Anonymous Coward User ID: 76713546 ![]() 03/18/2022 05:52 PM Report Abusive Post Report Copyright Violation | OP, the problem is when PCR is used incorrectly, such as in the case of covid where they amplified the sample to such an extent that they were detecting covid where none really existed in sufficient amounts to cause disease, or they were amplifying "dead" virus 40+ times and saying you have covid. PCR is an amazing technology if used appropriately. In the case of covid it was abused to show something that wasn't there. Quoting: Anonymous Coward 76713546 This is how i've understood it as well...So essentially the DNA result is so far away from the original that the margin of error is almost 100% right? Every amplification cycle doubles the amount. After 40 cycles, assuming you started with 10 fragments of starting material, you would have something on the order of 5x10 to the 12th copies. 5,000,000,000,000 That's a LOT of copies and will lead to false positives |
IAMTHATGUY User ID: 79280147 ![]() 03/18/2022 05:53 PM Report Abusive Post Report Copyright Violation | It's used frequently in cancer diagnostics, so yes. To be used for covid...NO Quoting: Anonymous Coward 76713546 Correct. It's used to amplify DNA, like in cancer dx. Anything connected to COVID (or any other communicable pathogens) would mean they were doing gain of function research. If they're saying it's ONLY a diagnostic tool, they're lying motherf***ers. "Peace in our time? All it took was everybody about to die." “The way I see it, there’s only three kinds of people in this world. Bad ones, ones you follow, and ones you need to protect.” - Amos Burton |
We Are Slaves (OP) User ID: 78097503 ![]() 03/18/2022 05:55 PM ![]() Report Abusive Post Report Copyright Violation | OP, the problem is when PCR is used incorrectly, such as in the case of covid where they amplified the sample to such an extent that they were detecting covid where none really existed in sufficient amounts to cause disease, or they were amplifying "dead" virus 40+ times and saying you have covid. PCR is an amazing technology if used appropriately. In the case of covid it was abused to show something that wasn't there. Quoting: Anonymous Coward 76713546 This is how i've understood it as well...So essentially the DNA result is so far away from the original that the margin of error is almost 100% right? Every amplification cycle doubles the amount. After 40 cycles, assuming you started with 10 fragments of starting material, you would have something on the order of 5x10 to the 12th copies. 5,000,000,000,000 That's a LOT of copies and will lead to false positives So virtually 100% error even @ 20 cycles... Warning : The post above may be pure speculation. Thread: World War M3me Thread: Is Polymerase Chain Reaction a diagnostics instrument? (Ignore the UK flag, i'm Canadian) |
Eilonwy User ID: 82148571 ![]() 03/18/2022 05:58 PM ![]() Report Abusive Post Report Copyright Violation | Have we ever thought about whether it is the right thing to DO to multiply DNA like that? The ramifications... If DNA is the word of life... “A grower of turnips or shaper of clay, a commot Farmer or a king--every man is a hero if he strives more for others than for himself alone.” Lloyd Alexander, The Castle of Llyr |
We Are Slaves (OP) User ID: 78097503 ![]() 03/18/2022 05:59 PM ![]() Report Abusive Post Report Copyright Violation | the problem you're really going to face with this question OP... is.. Quoting: Anonymous Coward 70973481 are you talking PRE or POST gold standard? because as soon as they made a gold standard for covid, for example.. the tests became extremely accurate. Ouch, yeah, good point ![]() Warning : The post above may be pure speculation. Thread: World War M3me Thread: Is Polymerase Chain Reaction a diagnostics instrument? (Ignore the UK flag, i'm Canadian) |
Anonymous Coward User ID: 76713546 ![]() 03/18/2022 06:02 PM Report Abusive Post Report Copyright Violation | the problem you're really going to face with this question OP... is.. Quoting: Anonymous Coward 70973481 are you talking PRE or POST gold standard? because as soon as they made a gold standard for covid, for example.. the tests became extremely accurate. No it wasn't. The gold standard they picked was 40 PCR cycles. |
Anonymous Coward User ID: 76713546 ![]() 03/18/2022 06:08 PM Report Abusive Post Report Copyright Violation | OP, the problem is when PCR is used incorrectly, such as in the case of covid where they amplified the sample to such an extent that they were detecting covid where none really existed in sufficient amounts to cause disease, or they were amplifying "dead" virus 40+ times and saying you have covid. PCR is an amazing technology if used appropriately. In the case of covid it was abused to show something that wasn't there. Quoting: Anonymous Coward 76713546 This is how i've understood it as well...So essentially the DNA result is so far away from the original that the margin of error is almost 100% right? Every amplification cycle doubles the amount. After 40 cycles, assuming you started with 10 fragments of starting material, you would have something on the order of 5x10 to the 12th copies. 5,000,000,000,000 That's a LOT of copies and will lead to false positives So virtually 100% error even @ 20 cycles... I wouldn't say 100% error. Look, it is good at detecting minute amounts of DNA. But there is a limit on how much you amplify something where it becomes ridiculous. A safe number would be mid 20s for cycle number to get positive results that are meaningful. Above 30 gets you into false positive territory. |
We Are Slaves (OP) User ID: 78097503 ![]() 03/18/2022 06:12 PM ![]() Report Abusive Post Report Copyright Violation | ... Quoting: We Are Slaves This is how i've understood it as well...So essentially the DNA result is so far away from the original that the margin of error is almost 100% right? Every amplification cycle doubles the amount. After 40 cycles, assuming you started with 10 fragments of starting material, you would have something on the order of 5x10 to the 12th copies. 5,000,000,000,000 That's a LOT of copies and will lead to false positives So virtually 100% error even @ 20 cycles... I wouldn't say 100% error. Look, it is good at detecting minute amounts of DNA. But there is a limit on how much you amplify something where it becomes ridiculous. A safe number would be mid 20s for cycle number to get positive results that are meaningful. Above 30 gets you into false positive territory. I see, thanks for clarifying Warning : The post above may be pure speculation. Thread: World War M3me Thread: Is Polymerase Chain Reaction a diagnostics instrument? (Ignore the UK flag, i'm Canadian) |
Trail runner User ID: 72752299 ![]() 03/18/2022 06:15 PM Report Abusive Post Report Copyright Violation | I could ask this question all day long on fakebook and not get an answer, lets see what GLP has to say Quoting: We Are Slaves It depends how many cycles you run the amplification. A diagnostic test would indicate someone has or does not have an infection be it viral or bacterial. If inert Or partial RNA/DNA strands are in the sample being tested and amplified by 1000x you will most certainly test positive for what ever you are looking for but the likely hood you have symptoms or are infectious could be insignificant or zero. That’s why when the pandemic started most PCR instruments I am familiar with ran 60x amplification cycles and the infection rate was so high but many were asymptomatic. They have since lowered the cycle threshold to 30x and like magic less positives. |